Classify rRNA amplicon sequences

Taxonova assigns a taxonomy from domain to species to 16S rRNA amplicon and rRNA operon sequences, with a confidence at every rank.

Sequences

Choose file

FASTA, plain or gzip. Up to 20,000 sequences per run.

Region

Reference: Greengenes2 2024.09

Counts optional

Add count table

ASV or OTU table from DADA2 or QIIME 2 (TSV or CSV). Adds per-sample abundance.

Confidence thresholds

The model's own thresholds (default) Set a species confidence

Results

Load the files in R or Python

Rank Show Figure